I did fresh install of the OS.
Then started AutoPatcher directly and didn't use the Windows Update Facility.
I ran it again and again until all the updates are not installed, also rebooted as and when required.
But left with one update KB958690 with black colour text indicating update not installed.
So, whenever I used to continue it used to install then ask for reboot.
Then, I verified that the patch was already installed.
Then also, I went to the modules critical folder and executed the KB958690x64 update.
But it halted with the message "This update does not apply to your system."
I guess autopatcher is not able to verify if this update is installed or not.
Hope you fix this soon.
Keep up the good work.
Fan of AutoPatcher